Align-m is a multiple sequence alignment program written by Ivo Van Walle.

Align-m has the ability to accomplish the following tasks:

  • multiple sequence alignment,
  • include extra information to guide the sequence alignment,
  • multiple structural alignment,
  • homology modeling by (iteratively) combining sequence and structure alignment data,
  • 'filtering' of BLAST or other pairwise alignments,
  • combining many alignments into one consensus sequence,
  • multiple genome alignment (can cope with rearrangements).

See also

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